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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015877540.1_cds_XP_016436491.1_32347
CDS Infomation

[gene=LOC107762635] [db_xref=GeneID:107762635] [protein=protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X2] [protein_id=XP_016436491.1] [location=join(36476..36575,36789..36918,37009..37080,37207..37272,37380..37451,37539..37610,37709..37780,38220..38285,38394..38459,39314..39690,39795..40180,40580..40851,41069..41207,41766..41771)] [gbkey=CDS]
Sequence

ATGATTGGTTACATGATGCGTGGAATATATGTGAAGATTTTGTTGGTATTTGCAATTTTT
GCTGTTCAAGATTGCAAAGGGTTTACTGATCCTCGTGATGTTTTTGCTATAAATAGTTTG
TATACAAGTCTGGGCTACCCATTGCTTCCTGGATGGGTGCCATATGGATTAGACCCTTGT
GGTGATAAGTGGCATGGTGTACTTTGTGTCAACTCCAATGTAACTGCAATAGTGCTAAAT
GATTCAAATTTGGGAGGTGAACTAAGTGAGGGCATAGGAAGCTTTGCTTCAATCATACAA
ATAGATCTCAGTAACAACCATATTGGTGGCAGTATACCATCCAATTTGCCTGTTACCGTC
AAGACCTTGTCTCTCTCAGGTAACCAGCTTACTGGGAGCATTCCAGACACCCTATCCTCG
TTAGGGCAATTATCGGACTTGTCACTGAACAACAATCATCTTAGTGGAGTTATTCCAGAT
GCCTTTCAGCAGCTTAAGACTTTGATTAATATGGACTTATCTGGGAACAGTTTAAGTGGT
CAGCTGCCTCCTTCGATGGGGAATTTGTCGTCACTTACTACCTTACACTTGCAGAACAAT
CAGCTTTCTGGGATCCTGGATGTTTTGCAAGATCTTGCTCTAACAGATTTAAACATAGAG
AATAATTTGTTCTCTGGGCCAATACCAGCAAAATTGTTGAGCATCCCCACCTTCAGACGT
GCAGGCAACCCCTTTAACACTACTATCATCCCTTCGCCCGTGATATCGCCTTCTCCAGCA
CCATTTGCGGTGCTTTCTCCAGATGTAGCCCCTTCACTGCCATCTACTGTACCATCGGGC
CAAGGATTACAACACTCTGGAAGGCAAAAAAGTAGTAATTCAACCAAACACGTCAAATTT
ATTGCTATAGCCGGATTACTTACCCTTGTCATACTTGGATTGGGTGTTTGCCTTTTGATG
TCACGATATTTAAAAAGAAGAAGACAGACCCAAAAAGAAGCCAAGAGGCATCATGCATAT
GCATATAGTTCACCCAAGGGCACCCCTAAACATGATCAATCCGTGCAAAAACCTTATTAT
GATGCAGAAAAAGATGCAGGTCTGAGGCCAGGGACTGGAAATGGGAAAGCTCAGGGTAGG
AACATCTCACTGAATACTTCAGAGGCTGTGCAACATAAAGGCATGAAGAGTACAACATCA
TATACAGACAATGATCTCGATTCGGAGATGGAGTCGACCATATCTGATATTCTTCCACCA
CCGCCACCACCTTTTCTTTCAGCTCTTTCTGCTGAGAGGATGGTTGTAAATCCAATTTTG
CCCCCAATTACATCAGACAGACATGCTAAGAAGAATGTAAATTCTGCAGAGTTCTTCACC
ATTGCCTCTCTTCAGCAGTATACAAATAGCTTTTCTCAAGATAATCTTATTGGAGGAGGC
ATGCTTGGCACAGTCTACAGAGCCGAGTCTCCCAAAAAACTTTTGGCGGTCAAGAAACTG
GATACGGCTGTGACCAGGCGTCAAAGTGATCAAGAATTTGTTGAGATGGTGTCCAATATA
TCTAGACTTAAGCATGAAAACATTGTCAAACTTGTGGGTTACTGTTCGGAGCATGGGCAA
AGGCTACTTGTCTATGAGTACTGTAGAAATGGTACTCTCCACGAAGCATTGCACTTAGAT
GATGAGATCCACAGAAAACTTTCCTGGAGTACTCGTGTACGCATTGCACTTCAAGCAGCA
AGAGCACTAGAGTACTTGCACGAAGTTTGTCACCCACCTATTGTCCACCAGAACTTCAAG
TCCGCTAATGTTCTCCTTGATGATGAGCTTGCTGTGCGTATGTCAGATTGTGGTTTGGCA
CCTCTGATGTCATCTGATTCTACAACACAGTGTTGA

Peptide Sequence

PEP ID

XP_016436491.1
PEP Infomation

PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X2 [Nicotiana tabacum]
Sequence

MIGYMMRGIYVKILLVFAIFAVQDCKGFTDPRDVFAINSLYTSLGYPLLPGWVPYGLDPC
GDKWHGVLCVNSNVTAIVLNDSNLGGELSEGIGSFASIIQIDLSNNHIGGSIPSNLPVTV
KTLSLSGNQLTGSIPDTLSSLGQLSDLSLNNNHLSGVIPDAFQQLKTLINMDLSGNSLSG
QLPPSMGNLSSLTTLHLQNNQLSGILDVLQDLALTDLNIENNLFSGPIPAKLLSIPTFRR
AGNPFNTTIIPSPVISPSPAPFAVLSPDVAPSLPSTVPSGQGLQHSGRQKSSNSTKHVKF
IAIAGLLTLVILGLGVCLLMSRYLKRRRQTQKEAKRHHAYAYSSPKGTPKHDQSVQKPYY
DAEKDAGLRPGTGNGKAQGRNISLNTSEAVQHKGMKSTTSYTDNDLDSEMESTISDILPP
PPPPFLSALSAERMVVNPILPPITSDRHAKKNVNSAEFFTIASLQQYTNSFSQDNLIGGG
MLGTVYRAESPKKLLAVKKLDTAVTRRQSDQEFVEMVSNISRLKHENIVKLVGYCSEHGQ
RLLVYEYCRNGTLHEALHLDDEIHRKLSWSTRVRIALQAARALEYLHEVCHPPIVHQNFK
SANVLLDDELAVRMSDCGLAPLMSSDSTTQC

Transcript Sequence

Gene sequence data has not been registered.